DwC Conversion
Normal
0
/
ID_BATCHYID_BATCHCHANNEL_IDYCHANNEL_IDTRANSNAMEYTRANSNAMESTATUSYSTATUSLINES_READYLINES_READLINES_WRITTENYLINES_WRITTENLINES_UPDATEDYLINES_UPDATEDLINES_INPUTYLINES_INPUTLINES_OUTPUTYLINES_OUTPUTLINES_REJECTEDYLINES_REJECTEDERRORSYERRORSSTARTDATEYSTARTDATEENDDATEYENDDATELOGDATEYLOGDATEDEPDATEYDEPDATEREPLAYDATEYREPLAYDATELOG_FIELDYLOG_FIELD
ID_BATCHYID_BATCHSEQ_NRYSEQ_NRLOGDATEYLOGDATETRANSNAMEYTRANSNAMESTEPNAMEYSTEPNAMESTEP_COPYYSTEP_COPYLINES_READYLINES_READLINES_WRITTENYLINES_WRITTENLINES_UPDATEDYLINES_UPDATEDLINES_INPUTYLINES_INPUTLINES_OUTPUTYLINES_OUTPUTLINES_REJECTEDYLINES_REJECTEDERRORSYERRORSINPUT_BUFFER_ROWSYINPUT_BUFFER_ROWSOUTPUT_BUFFER_ROWSYOUTPUT_BUFFER_ROWS
ID_BATCHYID_BATCHCHANNEL_IDYCHANNEL_IDLOG_DATEYLOG_DATELOGGING_OBJECT_TYPEYLOGGING_OBJECT_TYPEOBJECT_NAMEYOBJECT_NAMEOBJECT_COPYYOBJECT_COPYREPOSITORY_DIRECTORYYREPOSITORY_DIRECTORYFILENAMEYFILENAMEOBJECT_IDYOBJECT_IDOBJECT_REVISIONYOBJECT_REVISIONPARENT_CHANNEL_IDYPARENT_CHANNEL_IDROOT_CHANNEL_IDYROOT_CHANNEL_ID
ID_BATCHYID_BATCHCHANNEL_IDYCHANNEL_IDLOG_DATEYLOG_DATETRANSNAMEYTRANSNAMESTEPNAMEYSTEPNAMESTEP_COPYYSTEP_COPYLINES_READYLINES_READLINES_WRITTENYLINES_WRITTENLINES_UPDATEDYLINES_UPDATEDLINES_INPUTYLINES_INPUTLINES_OUTPUTYLINES_OUTPUTLINES_REJECTEDYLINES_REJECTEDERRORSYERRORSLOG_FIELDNLOG_FIELD
0.0
0.0
10000
50
50
N
Y
50000
Y
N
1000
100
-
2011/08/04 14:42:31.000
admin
2012/05/31 14:16:42.000
Check catalog number uniquenessAbortY Check catalog number uniquenessMerge join type infoY Sort occurrencesCheck catalog number uniquenessY Write imagesReduce to one image per datasetY Write identificationsReduce to one identification per datasetY UnionSort preferred identificationsY Replace state/provGroup named areasY Replace state/provDenormalise named areasY Replace latin ranksDenormalise higher taxaY Rename higher taxon fieldsSort higher taxaY Remove empty imagesTrash canY Reduce meta for metaSort metaY Reduce images for metaSort imgDatasetTitleY Reduce ident for metaSort identDatasetTitleY Read type informationGroup type infoY Read occurrencesOccurrence transformationsY Read named areasNormalise named area classesY Read metadataReduce to one per datasetY Read imagesImages transformationsY Read identificationsIdentification transformationsY Read higher taxaLower ranksY Check preferred flagGet first identification recordY Check preferred flagFilter preferred identificationsY Occurrence transformationsSort occurrencesY Normalise named area classesReplace state/provY Normalise preferred flag vocabularySort identificationsY Lower ranksReplace latin ranksY Lower preferred flagNormalise preferred flag vocabularyY Images transformationsRemove empty imagesY Identification transformationsLower preferred flagY Group type infoSort type infoY Group named areasSort higher geographyY Get first identification recordUnionY Filter preferred identificationsWrite identificationsY Filter preferred identificationsUnionY Denormalise named areasSort named areasY Denormalise higher taxaConcatenate higher taxaY Create meta document.xmlWrite meta documentY Create eml documentWrite eml documentY Concatenate higher taxaRename higher taxon fieldsY Sort type infoMerge join type infoY Sort preferred identificationsMerge join identificationsY Sort named areasMerge join named areasY Sort metaMerge images for metaY Sort imgDatasetTitleMerge images for metaY Sort identificationsMerge join higher taxaY Sort identDatasetTitleMerge identifications for metaY Sort higher taxaMerge join higher taxaY Sort higher geographyMerge join higher geographyY Reduce to one per datasetReduce meta for metaY Reduce to one per datasetCreate eml documentY Reduce to one image per datasetReduce images for metaY Reduce to one identification per datasetReduce ident for metaY Merge images for metaMerge identifications for metaY Merge identifications for metaCreate meta document.xmlY Merge join higher taxaCheck preferred flagY Merge join higher geographyMerge join named areasY Merge join type infoMerge join higher geographyY Merge join identificationsWrite occurrencesY AbortWrite duplicate catalog number to fileY Get file namesGet parametersY Get parametersRead occurrencesY Get parametersRead type informationY Get parametersRead named areasY Get parametersRead imagesY Get parametersRead identificationsY Get parametersRead higher taxaY Get parametersRead metadataY Remove empty imagesWrite imagesY Merge join named areasMerge join identificationsY Create eml documentWrite dataset listY
Abort
Abort
Y
1
none
0
Duplicate catalog number found.
N
642
29
Y
Check catalog number uniqueness
Unique
Y
1
none
N
Y
duplicates
catalogNumber
N
535
74
Y
Check preferred flag
SwitchCase
Y
1
none
PreferredFlag
N
String
Get first identification record
0
Filter preferred identifications
1
Filter preferred identifications
933
459
Y
Concatenate higher taxa
ScriptValueMod
Y
1
none
N
0
Script 1
var higherClassification = replace(kingdom + "; " + phylum + "; " + classis + "; " + order + "; " + family, "null; ", "", "; null", "")
higherClassification
higherClassification
String
-1
-1
N
580
546
Y
Create eml document
ScriptValueMod
N
1
none
N
0
Script 1
// make up EML filename from dataset title
// (replace forbidden characters first)
emlFileName = base_dir + "/tmp/" + replace(title, "\\)", "", "\\(", "", "/", "_", " ", "_", "'", "", '"', '') + " eml";
datasetTitleModified = replace(title, "\\)", "", "\\(", "", "/", "_", " ", "_", "'", "", '"', '');
if (isEmpty(organisationName)) {
organisationName = (isEmpty(creator))? 'n/a':creator
}
contactAddressSnippet = (contactAddress == "")? '':' <address><deliveryPoint>' + escapeXml(contactAddress) + '</deliveryPoint></address>\n';
var eml = '\
<?xml version="1.0" encoding="utf-8"?>\n\
<eml:eml xmlns:eml="eml://ecoinformatics.org/eml-2.1.1"\n\
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\n\
xmlns:dc="http://purl.org/dc/terms/"\n\
xsi:schemaLocation="eml://ecoinformatics.org/eml-2.1.1 http://rs.gbif.org/schema/eml-gbif-profile/1.0/eml.xsd"\n\
packageId="619a4b95-1a82-4006-be6a-7dbe3c9b33c5/v7" system="http://gbif.org" scope="system">\n\
<dataset>\n\
<title>' + escapeXml(title) + '</title>\n\
<creator>\n\
<organizationName>' + escapeXml(organisationName) + '</organizationName>\n\
</creator>\n\
<metadataProvider>\n\
<organizationName>' + escapeXml(contactName) + '</organizationName>\n' + contactAddressSnippet + '\
<phone>' + escapeXml(contactPhone) + '</phone>\n\
<electronicMailAddress>' + escapeXml(contactEmail) + '</electronicMailAddress>\n\
</metadataProvider>\n\
<pubDate>' + year(new Date()) + '</pubDate>\n\
<abstract>\n\
<para>' + escapeXml(details) + '</para>\n\
</abstract>\n\
<intellectualRights>\n\
<para>' + escapeXml(intellectualRights) + '</para>\n\
</intellectualRights>\n\
<contact>\n\
<individualName>\n\
<surName>' + escapeXml(contactName) + '</surName>\n\
</individualName>\n' + contactAddressSnippet + '\
<phone>' + escapeXml(contactPhone) + '</phone>\n\
<electronicMailAddress>' + escapeXml(contactEmail) + '</electronicMailAddress>\n\
</contact>\n\
</dataset>\n\
<additionalMetadata>\n\
<metadata>\n\
<gbif>\n\
<dateStamp>' + replace(date2str(new Date(), "yyyy-MM-dd hh:mm:ss"), " ", "T") + '</dateStamp>\n\
<hierarchyLevel>dataset</hierarchyLevel>\n\
<citation>' + escapeXml(citation) + '</citation>\n\
<resourceLogoUrl>' + escapeXml(resourceLogoUrl) + '</resourceLogoUrl>\n\
</gbif>\n\
</metadata>\n\
</additionalMetadata>\n\
</eml:eml>\
'
eml
eml
String
-1
-1
N
emlFileName
emlFileName
String
-1
-1
N
datasetTitleModified
datasetTitleModified
String
-1
-1
N
organisationName
organisationName
String
-1
-1
Y
contactAddressSnippet
contactAddressSnippet
String
-1
-1
N
443
825
Y
Create meta document.xml
ScriptValueMod
Y
1
none
N
0
Script 1
// make up meta.xml filename from dataset title
// (replace forbidden characters first)
metaFileName = base_dir + "/tmp/" + replace(title, "\\)", "", "\\(", "", "/", "_", " ", "_", "'", "", '"', '') + " meta";
var metaCore = '\
<?xml version="1.0" encoding="UTF-8"?>\n\
<archive xmlns="http://rs.tdwg.org/dwc/text/">\n\
\n\
<core encoding="UTF-8" fieldsTerminatedBy="," linesTerminatedBy="\\n" fieldsEnclosedBy=\'"\' ignoreHeaderLines="1" \n\
rowType="http://rs.tdwg.org/dwc/terms/Occurrence">\n\
<files>\n\
<location>occurrence.txt</location>\n\
</files>\n\
<id index="0" />\n\
<!-- Occurrence fields -->\n\
<field index="0" term="http://rs.tdwg.org/dwc/terms/catalogNumber"/>\n\
<field index="1" term="http://rs.tdwg.org/dwc/terms/institutionCode"/>\n\
<field index="2" term="http://rs.tdwg.org/dwc/terms/collectionCode"/>\n\
<field index="3" term="http://rs.tdwg.org/dwc/terms/basisOfRecord"/>\n\
<field index="4" term="http://rs.tdwg.org/dwc/terms/occurrenceID"/>\n\
<field index="5" term="http://rs.tdwg.org/dwc/terms/fieldNumber"/>\n\
<field index="6" term="http://purl.org/dc/terms/modified"/>\n\
<field index="7" term="http://rs.tdwg.org/dwc/terms/eventID"/>\n\
<field index="8" term="http://rs.tdwg.org/dwc/terms/samplingProtocol"/>\n\
<field index="9" term="http://rs.tdwg.org/dwc/terms/habitat"/>\n\
<field index="10" term="http://rs.tdwg.org/dwc/terms/eventRemarks"/>\n\
<field index="11" term="http://rs.tdwg.org/dwc/terms/minimumElevationInMeters"/>\n\
<field index="12" term="http://rs.tdwg.org/dwc/terms/maximumElevationInMeters"/>\n\
<field index="13" term="http://rs.tdwg.org/dwc/terms/minimumDepthInMeters"/>\n\
<field index="14" term="http://rs.tdwg.org/dwc/terms/maximumDepthInMeters"/>\n\
<field index="15" term="http://rs.tdwg.org/dwc/terms/country"/>\n\
<field index="16" term="http://rs.tdwg.org/dwc/terms/countryCode"/>\n\
<field index="17" term="http://rs.tdwg.org/dwc/terms/locality"/>\n\
<field index="18" term="http://rs.tdwg.org/dwc/terms/verbatimLocality"/>\n\
<field index="19" term="http://rs.tdwg.org/dwc/terms/eventDate"/>\n\
<field index="20" term="http://rs.tdwg.org/dwc/terms/verbatimEventDate"/>\n\
<field index="21" term="http://rs.tdwg.org/dwc/terms/eventTime"/>\n\
<field index="22" term="http://rs.tdwg.org/dwc/terms/startDayOfYear"/>\n\
<field index="23" term="http://rs.tdwg.org/dwc/terms/endDayOfYear"/>\n\
<field index="24" term="http://rs.tdwg.org/dwc/terms/occurrenceDetails"/>\n\
<field index="25" term="http://rs.tdwg.org/dwc/terms/occurrenceRemarks"/>\n\
<field index="26" term="http://rs.tdwg.org/dwc/terms/sex"/>\n\
<field index="27" term="http://rs.tdwg.org/dwc/terms/decimalLatitude"/>\n\
<field index="28" term="http://rs.tdwg.org/dwc/terms/decimalLongitude"/>\n\
<field index="29" term="http://rs.tdwg.org/dwc/terms/coordinateUncertaintyInMeters"/>\n\
<field index="30" term="http://rs.tdwg.org/dwc/terms/verbatimCoordinateSystem"/>\n\
<field index="31" term="http://rs.tdwg.org/dwc/terms/verbatimSRS"/>\n\
<field index="32" term="http://rs.tdwg.org/dwc/terms/typeStatus"/>\n\
<field index="33" term="http://rs.tdwg.org/dwc/terms/stateProvince"/>\n\
<field index="34" term="http://rs.tdwg.org/dwc/terms/county"/>\n\
<field index="35" term="http://rs.tdwg.org/dwc/terms/municipality"/>\n\
<field index="36" term="http://rs.tdwg.org/dwc/terms/continent"/>\n\
<field index="37" term="http://rs.tdwg.org/dwc/terms/waterBody"/>\n\
<field index="38" term="http://rs.tdwg.org/dwc/terms/islandGroup"/>\n\
<field index="39" term="http://rs.tdwg.org/dwc/terms/island"/>\n\
<field index="40" term="http://rs.tdwg.org/dwc/terms/higherGeography"/>\n\
<!-- Identification fields -->\n\
<field index="41" term="http://rs.tdwg.org/dwc/terms/dateIdentified"/>\n\
<field index="42" term="http://rs.tdwg.org/dwc/terms/identifiedBy"/>\n\
<field index="43" term="http://rs.tdwg.org/dwc/terms/nomenclaturalCode"/>\n\
<field index="44" term="http://rs.tdwg.org/dwc/terms/taxonRemarks"/>\n\
<field index="45" term="http://rs.tdwg.org/dwc/terms/identificationQualifier"/>\n\
<field index="46" term="http://rs.tdwg.org/dwc/terms/identificationRemarks"/>\n\
<field index="47" term="http://rs.tdwg.org/dwc/terms/identificationReferences"/>\n\
<field index="48" term="http://rs.tdwg.org/dwc/terms/scientificName"/>\n\
<field index="49" term="http://rs.tdwg.org/dwc/terms/scientificNameAuthorship"/>\n\
<field index="50" term="http://rs.tdwg.org/dwc/terms/higherClassification"/>\n\
<field index="51" term="http://rs.tdwg.org/dwc/terms/kingdom"/>\n\
<field index="52" term="http://rs.tdwg.org/dwc/terms/phylum"/>\n\
<field index="53" term="http://rs.tdwg.org/dwc/terms/class"/>\n\
<field index="54" term="http://rs.tdwg.org/dwc/terms/order"/>\n\
<field index="55" term="http://rs.tdwg.org/dwc/terms/family"/>\n\
<field index="56" term="http://rs.tdwg.org/dwc/terms/genus"/>\n\
<field index="57" term="http://rs.tdwg.org/dwc/terms/subgenus"/>\n\
<field index="58" term="http://rs.tdwg.org/dwc/terms/specificEpithet"/>\n\
<field index="59" term="http://rs.tdwg.org/dwc/terms/infraspecificEpithet"/>\n\
<field index="60" term="http://rs.tdwg.org/dwc/terms/taxonRank"/>\n\
</core>\n\
'
var metaClosingTag = '\n</archive>'
if (imgDatasetTitle == null) {
var metaImages = ''
}
else {
var metaImages = '\
\n\
<extension encoding="UTF-8" fieldsTerminatedBy="," linesTerminatedBy="\\n" fieldsEnclosedBy=\'"\' ignoreHeaderLines="1"\n\
rowType="http://rs.gbif.org/terms/1.0/Image">\n\
<files>\n\
<location>image.txt</location>\n\
</files>\n\
<coreid index="0" />\n\
<field index="1" term="http://purl.org/dc/terms/identifier"/>\n\
<field index="2" term="http://purl.org/dc/terms/description"/>\n\
<field index="3" term="http://purl.org/dc/terms/format"/>\n\
<field index="4" term="http://purl.org/dc/terms/created"/>\n\
<field index="5" term="http://purl.org/dc/terms/creator"/>\n\
<field index="6" term="http://purl.org/dc/terms/license"/>\n\
<field index="7" term="http://purl.org/dc/terms/rightsHolder"/>\n\
</extension>\n\
'}
if (identDatasetTitle == null) {
var metaIdent = ''
}
else {
var metaIdent = '\
\n\
<extension encoding="UTF-8" fieldsTerminatedBy="," linesTerminatedBy="\\n" fieldsEnclosedBy=\'"\' ignoreHeaderLines="1"\n\
rowType="http://rs.tdwg.org/dwc/terms/Identification">\n\
<files>\n\
<location>identification.txt</location>\n\
</files>\n\
<coreid index="0" />\n\
<field index="1" term="http://rs.tdwg.org/dwc/terms/dateIdentified"/>\n\
<field index="2" term="http://rs.tdwg.org/dwc/terms/identifiedBy"/>\n\
<field index="3" term="http://rs.tdwg.org/dwc/terms/nomenclaturalCode"/>\n\
<field index="4" term="http://rs.tdwg.org/dwc/terms/taxonRemarks"/>\n\
<field index="5" term="http://rs.tdwg.org/dwc/terms/identificationQualifier"/>\n\
<field index="6" term="http://rs.tdwg.org/dwc/terms/identificationRemarks"/>\n\
<field index="7" term="http://rs.tdwg.org/dwc/terms/identificationReferences"/>\n\
<field index="8" term="http://rs.tdwg.org/dwc/terms/scientificName"/>\n\
<field index="9" term="http://rs.tdwg.org/dwc/terms/scientificNameAuthorship"/>\n\
<field index="10" term="http://rs.tdwg.org/dwc/terms/higherClassification"/>\n\
<field index="11" term="http://rs.tdwg.org/dwc/terms/kingdom"/>\n\
<field index="12" term="http://rs.tdwg.org/dwc/terms/phylum"/>\n\
<field index="13" term="http://rs.tdwg.org/dwc/terms/class"/>\n\
<field index="14" term="http://rs.tdwg.org/dwc/terms/order"/>\n\
<field index="15" term="http://rs.tdwg.org/dwc/terms/family"/>\n\
<field index="16" term="http://rs.tdwg.org/dwc/terms/genus"/>\n\
<field index="17" term="http://rs.tdwg.org/dwc/terms/subgenus"/>\n\
<field index="18" term="http://rs.tdwg.org/dwc/terms/specificEpithet"/>\n\
<field index="19" term="http://rs.tdwg.org/dwc/terms/infraspecificEpithet"/>\n\
<field index="20" term="http://rs.tdwg.org/dwc/terms/taxonRank"/>\n\
</extension>\n\
'}
metaFileName
metaFileName
String
-1
-1
N
metaCore
metaCore
String
-1
-1
N
metaClosingTag
metaClosingTag
String
-1
-1
N
metaImages
metaImages
String
-1
-1
N
metaIdent
metaIdent
String
-1
-1
N
952
739
Y
Denormalise higher taxa
Denormaliser
Y
1
none
HigherTaxonRank
catalogNumber
ScientificNameTree
HigherTaxonName
kingdom
kingdom
String
-1
-1
CONCAT_COMMA
HigherTaxonName
pyhlum
phylum
String
-1
-1
CONCAT_COMMA
HigherTaxonName
class
classis
String
-1
-1
CONCAT_COMMA
HigherTaxonName
order
order
String
-1
-1
CONCAT_COMMA
HigherTaxonName
family
family
String
-1
-1
CONCAT_COMMA
476
545
Y
Denormalise named areas
Denormaliser
Y
1
none
AreaClass
catalogNumber
AreaName
stateprovince
stateProvince
String
-1
-1
CONCAT_COMMA
AreaName
county
county
String
-1
-1
CONCAT_COMMA
AreaName
municipality
municipality
String
-1
-1
CONCAT_COMMA
AreaName
continent
continent
String
-1
-1
CONCAT_COMMA
AreaName
waterbody
waterBody
String
-1
-1
CONCAT_COMMA
AreaName
islandgroup
islandGroup
String
-1
-1
CONCAT_COMMA
AreaName
island
island
String
-1
-1
CONCAT_COMMA
583
274
Y
Filter preferred identifications
FilterRows
Y
1
none
Union
Write identifications
N
PreferredFlag
=
constantString1-1-1N
1027
502
Y
Get file names
FilesFromResult
N
1
none
28
63
Y
Get first identification record
UniqueRowsByHashSet
Y
1
none
N
N
catalogNumber
1030
410
Y
Get parameters
GetVariable
N
1
none
sort_size
${sort_size}
-
0
0
none
base_dir
${base_dir}
-
0
0
none
21
286
Y
Group named areas
MemoryGroupBy
Y
1
none
N
catalogNumber
higherGeography
AreaName
CONCAT_STRING
;
583
176
Y
Group type info
MemoryGroupBy
Y
1
none
N
catalogNumber
typeStatus
typeStatus
CONCAT_STRING
;
294
143
Y
Identification transformations
ScriptValueMod
Y
1
none
N
0
Script 1
// replace empty values with different concepts
if (isEmpty(dateIdentified)) {
dateIdentified = DateText;
}
if (isEmpty(identifiedBy)) {
if (IdentifierFullName == '') {
IdentifierFullName = trim(trim(IdentifierPrefix + " " + IdentifierGivenName) + " " + trim(IdentifierInheritedName + " " + IdentifierSuffix));
}
identifiedBy = IdentifierFullName
}
if (isEmpty(scientificNameAuthorship)) {
scientificNameAuthorship = (isEmpty(ZoologicalAuthorTeamOriginalAndYear))? BacterialAuthorTeamAndYear:ZoologicalAuthorTeamOriginalAndYear
}
if (isEmpty(genus)) {
genus = (!isEmpty(ZoologicalGenusOrMonomial))? ZoologicalGenusOrMonomial:
(!isEmpty(BacterialGenusOrMonomial))? BacterialGenusOrMonomial:ViralGenusOrMonomial
}
if (isEmpty(subgenus)) {
subgenus = BacterialSubgenus
}
if (isEmpty(specificEpithet)) {
specificEpithet = (!isEmpty(ZoologicalSpeciesEpithet))? ZoologicalSpeciesEpithet:BacterialSpeciesEpithet
}
if (isEmpty(infraspecificEpithet)) {
infraspecificEpithet = (!isEmpty(ZoologicalSubspeciesEpithet))? ZoologicalSubspeciesEpithet:BacterialSubspeciesEpithet
}
// make up occurrence filename from dataset title
identFileName = base_dir + "/tmp/" + replace(DatasetTitle, "\\)", "", "\\(", "", "/", "_", " ", "_", "'", "", '"', '') + " identification";
identFileName
identFileName
String
-1
-1
N
dateIdentified
dateIdentified
String
-1
-1
Y
identifiedBy
identifiedBy
String
-1
-1
Y
IdentifierFullName
IdentifierFullName
String
-1
-1
Y
scientificNameAuthorship
scientificNameAuthorship
String
-1
-1
Y
genus
genus
String
-1
-1
Y
subgenus
subgenus
String
-1
-1
Y
specificEpithet
specificEpithet
String
-1
-1
Y
infraspecificEpithet
infraspecificEpithet
String
-1
-1
Y
307
463
Y
Images transformations
ScriptValueMod
Y
1
none
N
0
Script 1
// replace empty value
if (identifier == '') {
var identifier = ProductURI;
}
// make up images filename from dataset title
// (replace forbidden characters first)
imgFileName = base_dir + "/tmp/" + replace(DatasetTitle, "\\)", "", "\\(", "", "/", "_", " ", "_", "'", "", '"', '') + " image";
imgFileName
imgFileName
String
-1
-1
N
identifier
identifier
String
-1
-1
Y
296
352
Y
Lower preferred flag
StringOperations
Y
1
none
PreferredFlag
none
lower
none
no
none
none
none
438
464
Y
Lower ranks
StringOperations
Y
1
none
HigherTaxonRank
none
lower
none
no
none
none
none
274
543
Y
Merge identifications for meta
MergeJoin
Y
1
none
LEFT OUTER
Merge images for meta
Sort identDatasetTitle
title
identDatasetTitle
796
736
Y
Merge images for meta
MergeJoin
Y
1
none
LEFT OUTER
Sort meta
Sort imgDatasetTitle
title
imgDatasetTitle
653
736
Y
Merge join higher geography
MergeJoin
Y
1
none
LEFT OUTER
Merge join type info
Sort higher geography
catalogNumber
catalogNumber
783
99
Y
Merge join higher taxa
MergeJoin
N
1
none
LEFT OUTER
Sort identifications
Sort higher taxa
catalogNumber
ScientificNameTree
catalogNumber
ScientificNameTree
823
461
Y
Merge join identifications
MergeJoin
Y
1
none
LEFT OUTER
Merge join named areas
Sort preferred identifications
catalogNumber
catalogNumber
1129
101
Y
Merge join named areas
MergeJoin
Y
1
none
LEFT OUTER
Merge join higher geography
Sort named areas
catalogNumber
catalogNumber
938
99
Y
Merge join type info
MergeJoin
Y
1
none
LEFT OUTER
Check catalog number uniqueness
Sort type info
catalogNumber
catalogNumber
635
98
Y
Normalise named area classes
StringOperations
Y
1
none
AreaClass
both
lower
none
no
none
none
none
288
247
Y
Normalise preferred flag vocabulary
ValueMapper
Y
1
none
PreferredFlag
true
1
yes
1
y
1
false
0
no
0
n
0
544
464
Y
Occurrence transformations
ScriptValueMod
Y
1
none
N
0
Script 1
// if coordinates are present, set verbatimCoordinateSystem
if (isEmpty(decimalLongitude) && isEmpty(decimalLatitude)) {
verbatimCoordinateSystem = "";
}
else {
verbatimCoordinateSystem = "decimal degrees";
}
// make up occurrence filename from dataset title
occFileName = base_dir + "/tmp/" + replace(DatasetTitle, "\\)", "", "\\(", "", "/", "_", " ", "_", "'", "", '"', '') + " occurrence";
errFileName = base_dir + "/duplicate"
occFileName
occFileName
String
-1
-1
N
verbatimCoordinateSystem
verbatimCoordinateSystem
String
-1
-1
N
errFileName
errFileName
String
-1
-1
N
289
55
Y
Read higher taxa
getXMLData
Y
1
none
N
N
N
N
N
N
N
N
N
Y
UTF-8
C:\Program Files\pentaho\design-tools\data-integration\abcd.xml
N
N
HigherTaxonName
hispid:HigherTaxonName
node
String
-1
-1
none
N
HigherTaxonRank
hispid:HigherTaxonRank
node
String
-1
-1
none
N
catalogNumber
../../../../../../hispid:UnitID
node
String
-1
-1
none
N
ScientificNameTree
../../hispid:ScientificName
node
String
-1
-1
both
N
0
/hispid:DataSets/hispid:DataSet/hispid:Units/hispid:Unit/hispid:Identifications/hispid:Identification/hispid:Result/hispid:TaxonIdentified/hispid:HigherTaxa/hispid:HigherTaxon
Y
Y
path
160
543
Y
Read identifications
getXMLData
Y
1
none
N
N
N
N
N
N
N
N
N
Y
UTF-8
C:\Program Files\pentaho\design-tools\data-integration\abcd.xml
N
N
catalogNumber
../../hispid:UnitID
node
String
-1
-1
none
N
ScientificNameTree
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName
node
String
-1
-1
both
N
dateIdentified
hispid:Date/hispid:ISODateTimeBegin
node
String
-1
-1
none
N
DateText
hispid:Date/hispid:DateText
node
String
-1
-1
none
N
identifiedBy
hispid:Identifiers/hispid:IdentifiersText
node
String
-1
-1
none
N
IdentifierFullName
hispid:Identifiers/hispid:Identifier/hispid:PersonName/hispid:FullName
node
String
-1
-1
none
N
IdentifierInheritedName
hispid:Identifiers/hispid:Identifier/hispid:PersonName/hispid:AtomisedName/hispid:InheritedName
node
String
-1
-1
none
N
IdentifierGivenName
hispid:Identifiers/hispid:Identifier/hispid:PersonName/hispid:AtomisedName/hispid:GivenName
node
String
-1
-1
none
N
IdentifierPrefix
hispid:Identifiers/hispid:Identifier/hispid:PersonName/hispid:AtomisedName/hispid:Prefix
node
String
-1
-1
none
N
IdentifierSuffix
hispid:Identifiers/hispid:Identifier/hispid:PersonName/hispid:AtomisedName/hispid:Suffix
node
String
-1
-1
none
N
nomenclaturalCode
hispid:Result/hispid:TaxonIdentified/hispid:Code
node
String
-1
-1
none
N
taxonRemarks
hispid:Result/hispid:TaxonIdentified/hispid:NameComments
node
String
-1
-1
none
N
identificationQualifier
hispid:Result/hispid:TaxonIdentified/hispid:IdentificationQualifier
node
String
-1
-1
none
N
identificationRemarks
hispid:Notes
node
String
-1
-1
none
N
identificationReferences
hispid:References/hispid:Reference/hispid:TitleCitation
node
String
-1
-1
none
N
scientificName
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:FullScientificNameString
node
String
-1
-1
none
N
scientificNameAuthorship
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Botanical/hispid:AuthorTeam
node
String
-1
-1
none
N
ZoologicalAuthorTeamOriginalAndYear
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Zoological/hispid:AuthorTeamOriginalAndYear
node
String
-1
-1
none
N
BacterialAuthorTeamAndYear
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Bacterial/hispid:AuthorTeamAndYear
node
String
-1
-1
none
N
genus
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Botanical/hispid:GenusOrMonomial
node
String
-1
-1
none
N
ZoologicalGenusOrMonomial
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Zoological/hispid:GenusOrMonomial
node
String
-1
-1
none
N
BacterialGenusOrMonomial
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Bacterial/hispid:GenusOrMonomial
node
String
-1
-1
none
N
ViralGenusOrMonomial
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Viral/hispid:GenusOrMonomial
node
String
-1
-1
none
N
subgenus
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Zoological/hispid:Subgenus
node
String
-1
-1
none
N
BacterialSubgenus
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Bacterial/hispid:Subgenus
node
String
-1
-1
none
N
specificEpithet
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Botanical/hispid:FirstEpithet
node
String
-1
-1
none
N
ZoologicalSpeciesEpithet
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Zoological/hispid:SpeciesEpithet
node
String
-1
-1
none
N
BacterialSpeciesEpithet
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Bacterial/hispid:SpeciesEpithet
node
String
-1
-1
none
N
infraspecificEpithet
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Botanical/hispid:InfraspecificEpithet
node
String
-1
-1
none
N
ZoologicalSubspeciesEpithet
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Zoological/hispid:SubspeciesEpithet
node
String
-1
-1
none
N
BacterialSubspeciesEpithet
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Bacterial/hispid:SubspeciesEpithet
node
String
-1
-1
none
N
taxonRank
hispid:Result/hispid:TaxonIdentified/hispid:ScientificName/hispid:NameAtomised/hispid:Botanical/hispid:Rank
node
String
-1
-1
none
N
PreferredFlag
hispid:PreferredFlag
node
String
-1
-1
none
N
DatasetTitle
../../../../hispid:Metadata/hispid:Description/hispid:Representation/hispid:Title
node
String
-1
-1
none
N
0
/hispid:DataSets/hispid:DataSet/hispid:Units/hispid:Unit/hispid:Identifications/hispid:Identification
Y
Y
path
165
462
Y
Read images
getXMLData
Y
1
none
N
N
N
N
N
N
N
N
N
Y
UTF-8
C:\Program Files\pentaho\design-tools\data-integration\abcd.xml
N
N
identifier
hispid:FileURI
node
String
-1
-1
none
N
ProductURI
hispid:ProductURI
node
String
-1
-1
none
N
description
hispid:Comment
node
String
-1
-1
none
N
format
hispid:Format
node
String
-1
-1
none
N
created
hispid:CreatedDate
node
String
-1
-1
none
N
creator
hispid:Creator
node
String
-1
-1
none
N
license
hispid:IPR/hispid:Licenses/hispid:License/hispid:Text
node
String
-1
-1
none
N
rightsHolder
hispid:IPR/hispid:IPRDeclarations/hispid:IPRDeclaration/hispid:Text
node
String
-1
-1
none
N
catalogNumber
../../hispid:UnitID
node
String
-1
-1
none
N
DatasetTitle
../../../../hispid:Metadata/hispid:Description/hispid:Representation/hispid:Title
node
String
-1
-1
none
N
0
/hispid:DataSets/hispid:DataSet/hispid:Units/hispid:Unit/hispid:MultiMediaObjects/hispid:MultiMediaObject
Y
Y
path
161
349
Y
Read metadata
getXMLData
Y
1
none
N
N
N
N
N
N
N
N
N
Y
UTF-8
C:\Program Files\pentaho\design-tools\data-integration\abcd.xml
N
N
title
hispid:Metadata/hispid:Description/hispid:Representation/hispid:Title
node
String
-1
-1
none
N
details
hispid:Metadata/hispid:Description/hispid:Representation/hispid:Details
node
String
-1
-1
none
N
creator
hispid:Metadata/hispid:RevisionData/hispid:Creators
node
String
-1
-1
none
N
intellectualRights
hispid:Metadata/hispid:IPRStatements/hispid:IPRDeclarations/hispid:IPRDeclaration/hispid:Text
node
String
-1
-1
none
N
citation
hispid:Metadata/hispid:IPRStatements/hispid:Citations/hispid:Citation/hispid:Text
node
String
-1
-1
none
N
resourceLogoUrl
hispid:Metadata/hispid:IconURI
node
String
-1
-1
none
N
contactName
hispid:ContentContacts/hispid:ContentContact/hispid:Name
node
String
-1
-1
none
N
contactAddress
hispid:ContentContacts/hispid:ContentContact/hispid:Address
node
String
-1
-1
none
N
contactPhone
hispid:ContentContacts/hispid:ContentContact/hispid:Phone
node
String
-1
-1
none
N
contactEmail
hispid:ContentContacts/hispid:ContentContact/hispid:Email
node
String
-1
-1
none
N
organisationName
hispid:Metadata/hispid:Owners/hispid:Owner/hispid:Organisation/hispid:Name/hispid:Representation/hispid:Text
node
String
-1
-1
none
N
0
/hispid:DataSets/hispid:DataSet
Y
Y
path
167
734
Y
Read named areas
getXMLData
Y
1
none
N
N
N
N
N
N
N
N
N
Y
rowNum
UTF-8
C:\Program Files\pentaho\design-tools\data-integration\abcd.xml
N
N
AreaClass
hispid:AreaClass
node
String
-1
-1
none
N
AreaName
hispid:AreaName
node
String
-1
-1
none
N
catalogNumber
../../../hispid:UnitID
node
String
-1
-1
none
N
0
/hispid:DataSets/hispid:DataSet/hispid:Units/hispid:Unit/hispid:Gathering/hispid:NamedAreas/hispid:NamedArea
Y
Y
path
156
246
Y
Read occurrences
getXMLData
Y
1
none
N
N
N
N
N
N
N
N
N
Y
UTF-8
C:\Program Files\pentaho\design-tools\data-integration\abcd.xml
N
N
institutionCode
hispid:SourceInstitutionID
node
String
-1
-1
none
N
collectionCode
hispid:SourceID
node
String
-1
-1
none
N
catalogNumber
hispid:UnitID
node
String
-1
-1
none
N
basisOfRecord
hispid:RecordBasis
node
String
-1
-1
none
N
occurrenceID
hispid:UnitGUID
node
String
-1
-1
none
N
fieldNumber
hispid:CollectorsFieldNumber
node
String
-1
-1
none
N
modified
hispid:DateLastEdited
node
String
-1
-1
none
N
minimumElevationInMeters
hispid:Gathering/hispid:Altitude/hispid:MeasurementOrFactAtomised/hispid:LowerValue
node
String
-1
-1
none
N
maximumElevationInMeters
hispid:Gathering/hispid:Altitude/hispid:MeasurementOrFactAtomised/hispid:UpperValue
node
String
-1
-1
none
N
minimumDepthInMeters
hispid:Gathering/hispid:Depth/hispid:MeasurementOrFactAtomised/hispid:LowerValue
node
String
-1
-1
none
N
maximumDepthInMeters
hispid:Gathering/hispid:Depth/hispid:MeasurementOrFactAtomised/hispid:UpperValue
node
String
-1
-1
none
N
country
hispid:Gathering/hispid:Country/hispid:Name
node
String
-1
-1
none
N
countryCode
hispid:Gathering/hispid:Country/hispid:ISO3166Code
node
String
-1
-1
none
N
locality
hispid:Gathering/hispid:LocalityText
node
String
-1
-1
none
N
verbatimLocality
hispid:Gathering/hispid:AreaDetail
node
String
-1
-1
none
N
eventDate
hispid:Gathering/hispid:DateTime/hispid:ISODateTimeBegin
node
String
-1
-1
none
N
verbatimEventDate
hispid:Gathering/hispid:DateTime/hispid:DateText
node
String
-1
-1
none
N
eventTime
hispid:Gathering/hispid:DateTime/hispid:TimeOfDayBegin
node
String
-1
-1
none
N
startDayOfYear
hispid:Gathering/hispid:DateTime/hispid:DayNumberBegin
node
String
-1
-1
none
N
endDayOfYear
hispid:Gathering/hispid:DateTime/hispid:DayNumberEnd
node
String
-1
-1
none
N
decimalLongitude
hispid:Gathering/hispid:SiteCoordinateSets/hispid:SiteCoordinates/hispid:CoordinatesLatLong/hispid:LongitudeDecimal
node
String
-1
-1
none
N
decimalLatitude
hispid:Gathering/hispid:SiteCoordinateSets/hispid:SiteCoordinates/hispid:CoordinatesLatLong/hispid:LatitudeDecimal
node
String
-1
-1
none
N
coordinateUncertaintyInMeters
hispid:Gathering/hispid:SiteCoordinateSets/hispid:SiteCoordinates/hispid:CoordinatesLatLong/hispid:CoordinateErrorDistanceInMeters
node
String
-1
-1
none
N
verbatimSRS
hispid:Gathering/hispid:SiteCoordinateSets/hispid:SiteCoordinates/hispid:CoordinatesLatLong/hispid:SpatialDatum
node
String
-1
-1
none
N
eventID
hispid:Gathering/hispid:Code
node
String
-1
-1
none
N
samplingProtocol
hispid:Gathering/hispid:Method
node
String
-1
-1
none
N
habitat
hispid:Gathering/hispid:Biotope/hispid:Text
node
String
-1
-1
none
N
eventRemarks
hispid:Gathering/hispid:Notes
node
String
-1
-1
none
N
occurrenceRemarks
hispid:Notes
node
String
-1
-1
none
N
occurrenceDetails
hispid:RecordURI
node
String
-1
-1
none
N
sex
hispid:Sex
node
String
-1
-1
none
N
DatasetTitle
../../hispid:Metadata/hispid:Description/hispid:Representation/hispid:Title
node
String
-1
-1
none
N
0
/hispid:DataSets/hispid:DataSet/hispid:Units/hispid:Unit
Y
Y
path
158
55
Y
Read type information
getXMLData
Y
1
none
N
N
N
N
N
N
N
N
N
Y
rowNum
UTF-8
C:\Program Files\pentaho\design-tools\data-integration\abcd.xml
N
N
N
N
typeStatus
hispid:TypeStatus
node
String
-1
-1
none
N
catalogNumber
../../../hispid:UnitID
node
String
-1
-1
none
N
0
/hispid:DataSets/hispid:DataSet/hispid:Units/hispid:Unit/hispid:SpecimenUnit/hispid:NomenclaturalTypeDesignations/hispid:NomenclaturalTypeDesignation
Y
Y
path
156
143
Y
Reduce ident for meta
SelectValues
Y
1
none
DatasetTitle
identDatasetTitle
-2
-2
N
829
668
Y
Reduce images for meta
SelectValues
Y
1
none
DatasetTitle
imgDatasetTitle
-2
-2
N
591
611
Y
Reduce meta for meta
SelectValues
Y
1
none
title
-2
-2
base_dir
-2
-2
N
440
736
Y
Reduce to one identification per dataset
UniqueRowsByHashSet
N
1
none
N
N
DatasetTitle
1030
668
Y
Reduce to one image per dataset
UniqueRowsByHashSet
N
1
none
N
N
DatasetTitle
897
610
Y
Reduce to one per dataset
UniqueRowsByHashSet
N
1
none
N
N
title
297
735
Y
Remove empty images
FilterRows
Y
1
none
Write images
Trash can
N
identifier
IS NOT NULL
437
352
Y
Rename higher taxon fields
SelectValues
Y
1
none
N
classis
class
-
-2
-2
false
700
546
Y
Replace latin ranks
ValueMapper
Y
1
none
HigherTaxonRank
regnum
kingdom
subregnum
subkingdom
superclassis
superclass
classis
class
subclassis
subclass
superordo
superorder
ordo
order
subordo
suborder
superfamilia
superfamily
familia
family
subfamilia
subfamily
tribus
tribe
371
544
Y
Replace state/prov
ValueMapper
N
1
none
AreaClass
state
stateprovince
province
stateprovince
438
247
Y
Sort higher geography
SortRows
Y
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
catalogNumber
Y
Y
717
175
Y
Sort higher taxa
SortRows
N
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
catalogNumber
Y
Y
ScientificNameTree
Y
Y
789
547
Y
Sort identDatasetTitle
SortRows
N
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
identDatasetTitle
Y
Y
679
668
Y
Sort identifications
SortRows
Y
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
catalogNumber
Y
Y
ScientificNameTree
Y
Y
688
464
Y
Sort imgDatasetTitle
SortRows
N
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
imgDatasetTitle
Y
Y
418
612
Y
Sort meta
SortRows
N
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
title
Y
Y
538
736
Y
Sort named areas
SortRows
Y
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
catalogNumber
Y
Y
746
277
Y
Sort occurrences
SortRows
Y
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
catalogNumber
Y
Y
425
54
Y
Sort preferred identifications
SortRows
Y
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
catalogNumber
Y
Y
1126
234
Y
Sort type info
SortRows
Y
1
none
%%java.io.tmpdir%%
out
${sort_size}
N
N
catalogNumber
Y
Y
428
143
Y
Trash can
Dummy
Y
1
none
565
387
Y
Union
Dummy
Y
1
none
1126
456
Y
Write dataset list
TextFileOutput
Y
1
none
;
"
N
N
DOS
None
UTF-8
N
${base_dir}/tmp/datasets
N
Y
list
N
N
N
N
N
N
Y
N
N
0
datasetTitleModified
String
none
-1
-1
575
868
Y
Write duplicate catalog number to file
TextFileOutput
Y
1
none
;
"
N
N
DOS
None
Y
errFileName
output\duplicate
N
Y
txt
N
N
N
N
N
N
Y
N
N
0
catalogNumber
String
none
-1
-1
800
27
Y
Write eml document
TextFileOutput
Y
1
none
;
N
N
DOS
None
UTF-8
Y
emlFileName
file
N
Y
xml
N
N
N
N
N
N
Y
N
Y
0
eml
String
none
-1
-1
1149
829
Y
Write identifications
TextFileOutput
Y
1
none
,
"
Y
N
DOS
None
UTF-8
Y
identFileName
C:\Users\j.holetschek\Desktop\pentaho\occurrence
N
Y
txt
N
N
N
N
N
N
Y
N
Y
0
catalogNumber
String
none
-1
-1
dateIdentified
String
none
-1
-1
identifiedBy
String
none
-1
-1
nomenclaturalCode
String
none
-1
-1
taxonRemarks
String
none
-1
-1
identificationQualifier
String
none
-1
-1
identificationRemarks
String
none
-1
-1
identificationReferences
String
none
-1
-1
scientificName
String
none
-1
-1
scientificNameAuthorship
String
none
-1
-1
higherClassification
String
none
-1
-1
kingdom
String
none
-1
-1
phylum
String
none
-1
-1
class
String
none
-1
-1
order
String
none
-1
-1
family
String
none
-1
-1
genus
String
none
-1
-1
subgenus
String
none
-1
-1
specificEpithet
String
none
-1
-1
infraspecificEpithet
String
none
-1
-1
taxonRank
String
none
-1
-1
1149
550
Y
Write images
TextFileOutput
Y
1
none
,
"
Y
N
DOS
None
UTF-8
Y
imgFileName
C:\Users\j.holetschek\Desktop\pentaho\occurrence
N
Y
txt
N
N
N
N
N
N
Y
N
Y
0
catalogNumber
String
none
-1
-1
identifier
String
none
-1
-1
description
String
none
-1
-1
format
String
none
-1
-1
created
String
none
-1
-1
creator
String
none
-1
-1
license
String
none
-1
-1
rightsHolder
String
none
-1
-1
896
354
Y
Write meta document
TextFileOutput
Y
1
none
N
N
DOS
None
UTF-8
Y
metaFileName
file
N
Y
xml
N
N
N
N
N
N
Y
N
Y
0
metaCore
String
none
-1
-1
metaImages
String
none
-1
-1
metaIdent
String
none
-1
-1
metaClosingTag
String
none
-1
-1
1151
739
Y
Write occurrences
TextFileOutput
Y
1
none
,
"
Y
N
DOS
None
UTF-8
Y
occFileName
C:\Users\j.holetschek\Desktop\pentaho\occurrence
N
Y
txt
N
N
N
N
N
N
Y
N
Y
0
catalogNumber
String
none
-1
-1
institutionCode
String
none
-1
-1
collectionCode
String
none
-1
-1
basisOfRecord
String
none
-1
-1
occurrenceID
String
none
-1
-1
fieldNumber
String
none
-1
-1
modified
String
none
-1
-1
eventID
String
none
-1
-1
samplingProtocol
String
none
-1
-1
habitat
String
none
-1
-1
eventRemarks
String
none
-1
-1
minimumElevationInMeters
String
none
-1
-1
maximumElevationInMeters
String
none
-1
-1
minimumDepthInMeters
String
none
-1
-1
maximumDepthInMeters
String
none
-1
-1
country
String
none
-1
-1
countryCode
String
none
-1
-1
locality
String
none
-1
-1
verbatimLocality
String
none
-1
-1
eventDate
String
none
-1
-1
verbatimEventDate
String
none
-1
-1
eventTime
String
none
-1
-1
startDayOfYear
String
none
-1
-1
endDayOfYear
String
none
-1
-1
occurrenceDetails
String
none
-1
-1
occurrenceRemarks
String
none
-1
-1
sex
String
none
-1
-1
decimalLatitude
String
none
-1
-1
decimalLongitude
String
none
-1
-1
coordinateUncertaintyInMeters
String
none
-1
-1
verbatimCoordinateSystem
String
none
-1
-1
verbatimSRS
String
none
-1
-1
typeStatus
String
none
-1
-1
stateProvince
String
none
-1
-1
county
String
none
-1
-1
municipality
String
none
-1
-1
continent
String
none
-1
-1
waterBody
String
none
-1
-1
islandGroup
String
none
-1
-1
island
String
none
-1
-1
higherGeography
String
none
-1
-1
dateIdentified
String
none
-1
-1
identifiedBy
String
none
-1
-1
nomenclaturalCode
String
none
-1
-1
taxonRemarks
String
none
-1
-1
identificationQualifier
String
none
-1
-1
identificationRemarks
String
none
-1
-1
identificationReferences
String
none
-1
-1
scientificName
String
none
-1
-1
scientificNameAuthorship
String
none
-1
-1
higherClassification
String
none
-1
-1
kingdom
String
none
-1
-1
phylum
String
none
-1
-1
class
String
none
-1
-1
order
String
none
-1
-1
family
String
none
-1
-1
genus
String
none
-1
-1
subgenus
String
none
-1
-1
specificEpithet
String
none
-1
-1
infraspecificEpithet
String
none
-1
-1
taxonRank
String
none
-1
-1
1140
15
Y
Check catalog number uniqueness
Abort
Y
N